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Open Microscopy

OME Remote Objects (OMERO) is a modern client-server software platform for visualising, managing, and annotating biological image data.

OMERO ships as a server application and a series of clients - Insight, Importer, Web and Editor that run on all the major operating systems.

The OMERO clients allow the scientist to remotely manage, view, annotate and measure multi-dimensional images from anywhere. For example, Omero Insight is used to organize the images into a collection of dataset.

OME is an umbrella term that stands for Open Microscopy Environment and covers:

- The OME file formats, including OME-XML and OME-TIFF, and the Bio-Formats Java library. The OME file formats, including OME-XML and OME-TIFF, and the Bio-Formats Java library.The OME file formats, including OME-XML and OME-TIFF, and the Bio-Formats Java library.
- The OME database systems for microscopy data management and analysis comprising the original OME Server and the OMERO.
- The OME consortium, the group behind these efforts.

Some of the OMERO Features includes:

Import Images: Import images from microscope, graphics and other imaging formats.

Manage and organise: Manage, organise and delete images within Projects and Datasets.

More File Formats: OMERO now imports all the formats read by Bio-Formats including microscopy, HCS, tissue scanner and graphics file formats. Over 60 in total.

MetaData: Improved metadata support — full visibility of image, microscope, and detector metadata.

Live Thumbnails: Adjust rendering of thumbnails and propagate across sets of images.

Export: Export any image as OME-TIFF, complete with metadata using the OME-XML standard.

Directory Import: Choose a directory of images to import and filter the contents by image format if desired.

Quality Assurance: Feedback system that allows users to send comments, bugs, or data files, and to track responses and updates.

Image Rendering: Turn channels on/off, change channel colours, adjust brightness and contrast. Copy and paste settings between images.

Remote Access: Connect to a server from any remote location. Choose a higher image compression level if connecting from a low bandwidth location.

Attachment: Attach files to images, such as pdf or word documents (protocols, results, etc.)

Search & Filter: Filter displayed images by properties such as name, tag, rating and comment. Search using tags, names, or any other text data.

Manage Users: Server administrators can add and manage users and groups with the web-admin tool.

Sharing: Share sets of images with other users and have a conversation about the data.

At Shantasoft, we provide the following services:

- Image rendering and custom image display in Omero Insight.
- Modify the look and feel, changing the display components, adding new functionalities, etc.,
- Customization of Omero server , database backup, user management and diskspace management etc.,